| Roberts Creek | Franklin, FL | 1.4 miles | SW |
| Pine Log Creek | Franklin, FL | 1.4 miles | SE |
| Sunday Rollaway Creek | Franklin, FL | 2.4 miles | SW |
| Monkey Creek | Franklin, FL | 2.7 miles | SE |
| Cypress Slough | Franklin, FL | 3.4 miles | SW |
| Tom Hahn Creek | Franklin, FL | 4.1 miles | NE |
| Fish Branch | Franklin, FL | 4.5 miles | SW |
| Gully Branch | Franklin, FL | 5.3 miles | NW |
| Crooked River | Franklin, FL | 5.8 miles | SW |
| New River | Franklin, FL | 6 miles | SW |
| Alligator Creek | Franklin, FL | 6 miles | NW |
| Cat Creek | Franklin, FL | 6.1 miles | SW |
| Brandy Creek | Franklin, FL | 6.1 miles | NE |
| Gator Creek | Franklin, FL | 6.3 miles | NW |
| Womack Creek | Franklin, FL | 6.8 miles | NE |
| Alligator Creek | Wakulla, FL | 7 miles | NE |
| Syfrett Creek | Wakulla, FL | 7.1 miles | NE |
| Bumpy Creek | Wakulla, FL | 7.2 miles | NE |
| Syrup Branch | Franklin, FL | 7.2 miles | SW |
| Carrabelle River | Franklin, FL | 7.2 miles | SW |
| Cow Creek | Wakulla, FL | 7.4 miles | NE |
| Trout Creek | Franklin, FL | 7.6 miles | SW |
| Boggy Jordan Bayou | Franklin, FL | 7.9 miles | SW |
| Haw Creek | Liberty, FL | 8.1 miles | NE |
| Big Spring Creek | Wakulla, FL | 9 miles | NE |
| Juniper Creek | Liberty, FL | 9.2 miles | NW |
| Little Tide Creek | Wakulla, FL | 9.7 miles | NE |
| Schoolhouse Branch | Wakulla, FL | 10.4 miles | NE |
| Vause Branch Ochlockonee River | Wakulla, FL | 10.5 miles | NW |
| Joel Branch | Wakulla, FL | 10.9 miles | NE |
| Titi Branch | Wakulla, FL | 11.2 miles | NE |
| Buckhorn Creek | Wakulla, FL | 11.6 miles | NE |
| Poplar Creek | Wakulla, FL | 11.7 miles | NE |
| Mill Creek | Wakulla, FL | 11.8 miles | NE |
| West Fork Syfrett Creek | Wakulla, FL | 11.9 miles | NE |
| East Fork Syfrett Creek | Wakulla, FL | 11.9 miles | NE |
| Ochlockonee River | Wakulla, FL | 12 miles | NE |
| Ochlockonee River | Wakulla, GA | 12 miles | NE |
| Camp Branch | Wakulla, FL | 12.1 miles | NE |
| Dead River | Wakulla, FL | 12.1 miles | NE |
| Duval Branch | Wakulla, FL | 12.3 miles | NE |
| Arbor Bush Branch | Wakulla, FL | 12.3 miles | NW |
| Mill Creek | Wakulla, FL | 12.4 miles | NE |
| Sopchoppy River | Wakulla, FL | 12.5 miles | NE |
| Bostick Branch | Wakulla, FL | 12.8 miles | NE |
| Deep Branch | Wakulla, FL | 13.4 miles | NE |
| Cow Creek | Franklin, FL | 13.5 miles | SW |
| Nero Branch New River | Liberty, FL | 13.9 miles | NW |
| Langston Branch | Wakulla, FL | 14.4 miles | NW |
| Gully Branch | Liberty, FL | 14.5 miles | NW |
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