| Sarah Ann Bayou | Okaloosa, FL | 0 miles | SW |
| Evans Slough | Washington, FL | 37 miles | NE |
| Mill Creek | Holmes, FL | 39.3 miles | NE |
| Sawed Slough | Holmes, FL | 40.3 miles | NE |
| Yellow Slough | Holmes, FL | 40.5 miles | NE |
| Red Slough | Holmes, FL | 41 miles | NE |
| Buckhead Slough | Holmes, FL | 41.1 miles | NE |
| Cork Slough | Holmes, FL | 41.5 miles | NE |
| Spring Branch | Holmes, FL | 41.5 miles | NE |
| Hickory Tree Flat Slough | Holmes, FL | 41.9 miles | NE |
| First Slough | Holmes, FL | 42.2 miles | NE |
| Hagans Slough | Holmes, FL | 42.5 miles | NE |
| Paul Branch | Holmes, FL | 42.6 miles | NE |
| Young Field Slough | Holmes, FL | 42.8 miles | NE |
| Bud Branch | Holmes, FL | 42.9 miles | NE |
| Sabine Inlet | Escambia, FL | 43 miles | SW |
| Sullivans Ditch | Santa Rosa, FL | 43.4 miles | NW |
| Alligator Bayou | Santa Rosa, FL | 43.4 miles | NW |
| Gum River | Santa Rosa, FL | 43.4 miles | NW |
| East River | Santa Rosa, FL | 43.7 miles | NW |
| Bayou Texar | Escambia, FL | 44.4 miles | SW |
| Saultsman Bayou | Santa Rosa, FL | 44.6 miles | NW |
| Woodbine Bayou | Santa Rosa, FL | 44.9 miles | NW |
| Long Lake Slough | Washington, FL | 48 miles | SE |
| Gum Branch | Holmes, FL | 52.7 miles | NE |
| Titi Branch | Jackson, FL | 56.5 miles | NE |
| Caney Bayou | Baldwin, AL | 57.8 miles | SW |
| Alligator Bayou | Baldwin, AL | 58.9 miles | SW |
| Old River | Baldwin, AL | 63.9 miles | SW |
| Goat Bayou | Baldwin, AL | 64.1 miles | SW |
| Stone Quarry Bayou | Baldwin, AL | 66.1 miles | SW |
| Cotton Bayou | Baldwin, AL | 68.3 miles | SW |
| Pippin Branch | Calhoun, FL | 68.7 miles | NE |
| Moccasin Bayou | Baldwin, AL | 69.2 miles | SW |
| Portage Creek | Baldwin, AL | 70.7 miles | SW |
| Middle River | Baldwin, AL | 71.5 miles | SW |
| Bear Creek | Baldwin, AL | 76.8 miles | SW |
| Maddox Slough | Gulf, FL | 77.3 miles | NE |
| Sand Bayou | Baldwin, AL | 79.9 miles | SW |
| Long Bayou | Baldwin, AL | 80.2 miles | SW |
| Chipola Cutoff | Gulf, FL | 81.7 miles | SE |
| Gum Drift Slough | Gulf, FL | 82.3 miles | SE |
| Wolf Slough | Jackson, FL | 82.4 miles | NE |
| Corley Slough | Gulf, FL | 82.6 miles | SE |
| Roberts Slough | Gulf, FL | 82.8 miles | SE |
| Burgess Creek | Gulf, FL | 83.1 miles | SE |
| Rudy Slough | Calhoun, FL | 83.1 miles | SE |
| Grayson Slough | Liberty, FL | 83.3 miles | SE |
| Raccoon Slough | Calhoun, FL | 83.5 miles | SE |
| Muddy Bayou | Baldwin, AL | 83.7 miles | SW |
|